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A volumetric cell-density network from a small registered image17 days ago
1. Simulate a registered cell map and inspect the image | 2. Select a reproducible roster | 3. Fit the volumetric GP and factor covariance | 4. Obtain and display zone networks | 5. Apply the same path to a processed image | References
ISPAT3D 0.3.1Sagnik Bhadury volumetric-network.Rmd
Matched section-wise 2D networks and a 3D comparison17 days ago
1. Prepare a small serial-section image | 2. Fix the cell roster before either fit | 3. Fit the section-wise planar model | 4. Compute and plot conditional networks | 5. Compare with the volumetric fit on identical cells | 6. Use processed serial-section data | References
ISPAT3D 0.3.1Sagnik Bhadury matched-planar-network.Rmd
A volumetric cell-density network from a small registered image28 days ago
1. Simulate a registered cell map and inspect the image | 2. Select a reproducible roster | 3. Fit the volumetric GP and factor covariance | 4. Obtain and display zone networks | 5. Apply the same path to a processed image | References
ISPAT3D 0.3.1Sagnik Bhadury volumetric-network.Rmd
Matched section-wise 2D networks and a 3D comparison28 days ago
1. Prepare a small serial-section image | 2. Fix the cell roster before either fit | 3. Fit the section-wise planar model | 4. Compute and plot conditional networks | 5. Compare with the volumetric fit on identical cells | 6. Use processed serial-section data | References
ISPAT3D 0.3.1Sagnik Bhadury matched-planar-network.Rmd